Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16861.1Bacterial regulatory helix-turn-helix protein, AraC family protein 17. (314 aa)    
Predicted Functional Partners:
ADP16919.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 19.
  
     0.693
ADP19101.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 37.
 
 
 0.679
ADP17553.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 24.
  
     0.649
ADP15689.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 12.
 
 
 0.615
ADP16385.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 16.
  
     0.613
ADP13949.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 5.
 
 
 0.593
ADP18180.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 31.
  
     0.529
ADP18157.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 30.
 
 
 0.523
ADP19563.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 39.
 
 
 0.517
ADP17034.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 21.
 
 
 0.513
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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