STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16869.1Transposase, IS3 family protein 1. (86 aa)    
Predicted Functional Partners:
ADP17095.1
Transposase, IS3/IS911 family protein 2.
 
  
 0.683
ADP17580.1
Transposase, IS3/IS911 family protein 3.
 
  
 0.683
ADP17096.1
Integrase family protein 3.
 
    0.682
ADP17579.1
Integrase family protein 4.
 
    0.682
ADP16870.1
Hypothetical protein.
       0.664
ADP16868.1
Hypothetical protein.
       0.545
ADP18461.1
Integrase family protein 6.
 
  
 0.503
ADP14217.1
Integrase family protein 1.
 
  
 0.502
ADP15946.1
Integrase family protein 2.
 
  
 0.502
ADP17870.1
Integrase family protein 5.
 
  
 0.502
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.