STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16878.1Bacterial regulatory helix-turn-helix protein, LysR family protein 111; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
ADP18145.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 159; Belongs to the LysR transcriptional regulatory family.
  
     0.638
ADP16879.1
Alpha/beta superfamily hydrolase.
 
    0.625
ADP16714.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 104; Belongs to the LysR transcriptional regulatory family.
  
     0.602
ADP15633.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 59; Belongs to the LysR transcriptional regulatory family.
  
     0.545
ADP16877.1
Hypothetical protein.
       0.541
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.488
ADP15882.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 73; Belongs to the LysR transcriptional regulatory family.
  
     0.487
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.481
ADP19467.1
HTH-type transcriptional regulator TrpI 2; Belongs to the LysR transcriptional regulatory family.
  
     0.456
ADP14484.1
Transcriptional regulator, LysR family domain protein 1.
  
     0.414
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.