Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16903.1Bacterial regulatory helix-turn-helix protein, LysR family protein 112; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
ADP18137.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 158; Belongs to the LysR transcriptional regulatory family.
  
     0.698
ADP13689.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 9; Belongs to the LysR transcriptional regulatory family.
  
     0.697
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.678
ADP17597.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 142; Belongs to the LysR transcriptional regulatory family.
  
     0.662
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.655
ADP17051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 121; Belongs to the LysR transcriptional regulatory family.
  
     0.594
ADP15135.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 52; Belongs to the LysR transcriptional regulatory family.
  
     0.553
ADP16904.1
Hypothetical protein.
       0.540
ADP16316.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 87; Belongs to the LysR transcriptional regulatory family.
  
     0.527
ADP17153.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 127; Belongs to the LysR transcriptional regulatory family.
  
     0.519
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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