STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16950.1Helix-turn-helix, type 11 domain protein. (409 aa)    
Predicted Functional Partners:
ADP16949.1
Streptogramin lyase.
 
     0.955
ADP16951.1
His Kinase A phosphoacceptor domain protein 9.
  
   0.740
ADP17543.1
Hypothetical protein.
 
     0.733
ADP17143.1
Hypothetical protein.
 
     0.659
qseB3
Transcriptional regulatory protein QseB 3.
       0.627
ADP19334.1
Sensory box protein 11.
  
 
 0.616
ADP17014.1
Putative membrane protein 43.
  
     0.565
ADP13626.1
Sensory box protein 2.
  
 
 0.531
ADP18003.1
Hypothetical protein.
  
 
 
 0.516
ADP16587.1
Sensory box protein 6.
  
 
 0.515
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.