STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16961.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
ADP16960.1
OmpA family protein 2.
 
     0.961
ADP16958.1
Hypothetical protein.
 
     0.958
ADP16959.1
Hypothetical protein.
 
     0.958
hctB
Histone H1-like protein HC2.
  
     0.705
ADP18127.1
Histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family.
  
     0.629
ADP17537.1
AIG2-like family protein 2.
  
     0.588
ADP16962.1
Hypothetical protein.
 
     0.543
ADP13634.1
Hypothetical protein.
  
     0.537
ADP18794.1
Fimbrial usher family protein 2.
  
     0.512
ADP19566.1
Hypothetical protein.
  
     0.507
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.