Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16969.1Bacterial regulatory helix-turn-helix protein, LysR family protein 115; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
ADP14677.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 43; Belongs to the LysR transcriptional regulatory family.
  
     0.618
ADP19474.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 201; Belongs to the LysR transcriptional regulatory family.
  
     0.603
ADP16970.1
enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.599
ADP16714.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 104; Belongs to the LysR transcriptional regulatory family.
  
     0.598
ADP16973.1
acyl-CoA dehydrogenase, middle domain protein 10.
 
    0.556
ADP19051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 185; Belongs to the LysR transcriptional regulatory family.
  
     0.548
ADP16972.1
acyl-CoA dehydrogenase, middle domain protein 9.
 
    0.511
ADP17674.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 144; Belongs to the LysR transcriptional regulatory family.
  
     0.504
ADP16968.1
High-affinity gluconate transporter.
       0.483
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.483
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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