Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16978.1Outer membrane autotransporter barrel domain protein 5. (2515 aa)    
Predicted Functional Partners:
ADP13745.1
Autotransporter beta-domain protein.
  
 0.722
ADP15777.1
YadA-like C-terminal domain protein 2.
 
   
 0.690
ADP15550.1
Hemolysin-type calcium-binding repeat family protein 2.
  
  
 0.562
ADP18312.1
Large subunit of N,N-dimethylformamidase.
  
  
 0.543
ADP14035.1
Hypothetical protein.
 
   
 0.516
ADP16719.1
Arylesterase.
  
 
 0.508
ADP16843.1
GDSL-like lipase/acylhydrolase family protein.
  
 
 0.508
ADP16835.1
Hypothetical protein.
  
     0.492
ADP17002.1
VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
  
  
 0.488
ADP14609.1
YadA-like C-terminal domain protein 1.
 
   
 0.485
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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