STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16980.1Bacterial regulatory helix-turn-helix protein, LysR family protein 116; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
ADP16979.1
Short chain dehydrogenase family protein 35.
       0.556
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.488
ADP17410.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 133; Belongs to the LysR transcriptional regulatory family.
  
     0.483
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.477
ADP19467.1
HTH-type transcriptional regulator TrpI 2; Belongs to the LysR transcriptional regulatory family.
  
     0.445
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.