STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17004.1Bacterial regulatory helix-turn-helix protein, LysR family protein 118; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ADP17006.1
Hypothetical protein.
 
    0.808
ADP13689.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 9; Belongs to the LysR transcriptional regulatory family.
  
     0.598
ADP17005.1
Carboxymuconolactone decarboxylase family protein 3.
     
 0.547
ADP18137.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 158; Belongs to the LysR transcriptional regulatory family.
  
     0.504
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.435
ADP17003.1
Cell division protein ZipA.
       0.419
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.