STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17072.1Bacterial regulatory helix-turn-helix protein, LysR family protein 123; Belongs to the LysR transcriptional regulatory family. (325 aa)    
Predicted Functional Partners:
ADP17073.1
Flavoprotein involved in K+ transport 2.
 
     0.894
dppB4
Dipeptide transport system permease protein DppB 4.
 
     0.809
ADP17075.1
Binding-protein-dependent transport system inner membrane component family protein 46.
       0.780
ADP17076.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
       0.777
ADP17077.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 6; Belongs to the ABC transporter superfamily.
       0.777
ADP17080.1
Carboxymuconolactone decarboxylase family protein 4; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
 
 
 0.762
ADP17078.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 20.
 
     0.746
ADP19088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 188; Belongs to the LysR transcriptional regulatory family.
  
     0.742
ADP14730.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 45; Belongs to the LysR transcriptional regulatory family.
  
     0.733
ADP15781.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 66; Belongs to the LysR transcriptional regulatory family.
  
     0.725
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.