Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17097.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
ADP15526.1
Hypothetical protein.
  
     0.590
ADP17919.1
Major facilitator superfamily protein 42.
  
     0.568
ADP17095.1
Transposase, IS3/IS911 family protein 2.
       0.524
ADP17096.1
Integrase family protein 3.
       0.524
ADP18174.1
Inner-membrane translocator 49; Belongs to the binding-protein-dependent transport system permease family.
  
     0.517
ADP17094.1
Hypothetical protein.
       0.508
ADP14492.1
Amidohydrolase family protein 7.
  
     0.498
ADP16248.1
Hypothetical protein.
  
     0.492
ADP17593.1
Methyltransferase domain protein 7.
  
     0.476
ADP18884.1
CAAX amino terminal protease family protein 2.
  
     0.472
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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