Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17142.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
ADP17141.1
Putative membrane protein 46.
 
     0.739
ADP15489.1
Hypothetical protein.
 
     0.714
ADP13672.1
Hypothetical protein.
  
     0.645
ADP16516.1
Transglycosylase SLT domain protein 3; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.
  
     0.636
ADP18734.1
Metallopeptidase family M24 family protein 3.
  
     0.599
ADP13671.1
Integral membrane protein 1.
  
     0.590
ADP17140.1
Diguanylate cyclase, GGDEF domain protein 15.
       0.566
ADP18751.1
Outer membrane autotransporter barrel domain protein 8.
  
     0.551
ADP16100.1
YcgR family protein.
  
     0.549
ADP16546.1
Protein involved in meta-pathway of phenol degradation 1.
 
     0.535
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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