STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17148.1Berberine and berberine like family protein. (463 aa)    
Predicted Functional Partners:
ADP17149.1
Polysaccharide deacetylase family protein 10.
       0.498
ADP17147.1
EPSP synthase family protein.
       0.451
nuoF
NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.425
ADP17145.1
Cytidine and deoxycytidylate deaminase zinc-binding region family protein.
 
    0.425
ADP18490.1
NAD-dependent formate dehydrogenase beta subunit.
   
 0.425
ADP15068.1
Electron transfer flavoprotein subunit alpha 1.
  
 
 0.423
ADP18263.1
Electron transfer flavoprotein subunit alpha 2.
  
 
 0.423
ADP13567.1
Ferredoxin-dependent glutamate synthase.
     
 0.411
ADP15067.1
Electron transfer flavoprotein subunit beta 1.
  
 
 0.409
ADP18264.1
Electron transfer flavoprotein subunit beta 2.
  
 
 0.409
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.