Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17150.1Putative membrane protein 48. (465 aa)    
Predicted Functional Partners:
ADP17151.1
Hypothetical protein.
       0.672
ADP16100.1
YcgR family protein.
  
     0.643
ADP15924.1
Pyoverdine synthetase F.
  
     0.626
ADP19148.1
Fusaric acid resistance protein family protein 2.
 
     0.586
ADP18717.1
Carbohydrate-binding family V/XII.
  
     0.570
ADP16550.1
MgtC family protein 1.
  
  
 0.562
ADP17316.1
MgtC family protein 2.
  
  
 0.562
ADP18619.1
MgtC family protein 3.
  
  
 0.562
ADP14774.1
Efflux transporter, RND family, MFP subunit 4; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.561
ADP15962.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein 2.
  
     0.500
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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