Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17191.1CoA-transferase family III family protein 28; Belongs to the CoA-transferase III family. (365 aa)    
Predicted Functional Partners:
ADP17192.1
Short chain dehydrogenase family protein 38.
   
  0.724
ADP17193.1
MaoC like domain protein 7.
 
 
 0.708
ADP17194.1
Acyl dehydratase 1.
 
 
 0.704
ADP17195.1
Thiolase, N-terminal domain protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
    0.639
ADP17196.1
2-nitropropane dioxygenase family protein 5.
 
    0.571
ADP18099.1
acyl-CoA dehydrogenase, N-terminal domain protein 13.
 
 
  0.536
ADP17199.1
acyl-CoA dehydrogenase, middle domain protein 11.
 
 
  0.528
ADP14307.1
Ring hydroxylating beta subunit family protein 3.
   
    0.513
ADP18093.1
acyl-CoA dehydrogenase, N-terminal domain protein 12.
 
 
  0.480
ADP17728.1
acyl-CoA dehydrogenase, C-terminal domain protein 1.
 
 
  0.465
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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