Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP17197.1Bacterial regulatory protein, LuxR family protein 9. (891 aa)    
Predicted Functional Partners:
ADP17198.1
Extra-cytoplasmic solute receptor family protein 88.
       0.561
ADP17196.1
2-nitropropane dioxygenase family protein 5.
       0.545
ADP17193.1
MaoC like domain protein 7.
 
     0.515
ADP17194.1
Acyl dehydratase 1.
 
     0.510
ADP17192.1
Short chain dehydrogenase family protein 38.
 
   
 0.483
ADP17195.1
Thiolase, N-terminal domain protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.476
ADP18791.1
AhpC/TSA family protein 11.
  
   
 0.445
ADP19334.1
Sensory box protein 11.
      
 0.410
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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