Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17200.1CoA-transferase family III family protein 29; Belongs to the CoA-transferase III family. (403 aa)    
Predicted Functional Partners:
ADP17201.1
enoyl-CoA hydratase/isomerase family protein 15; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.806
ADP17199.1
acyl-CoA dehydrogenase, middle domain protein 11.
  
 
  0.786
ADP17203.1
enoyl-CoA hydratase/isomerase family protein 16.
  
 
  0.644
ADP17202.1
Extra-cytoplasmic solute receptor family protein 89.
  
    0.593
ADP17198.1
Extra-cytoplasmic solute receptor family protein 88.
  
    0.504
ADP17191.1
CoA-transferase family III family protein 28; Belongs to the CoA-transferase III family.
 
    
0.409
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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