Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17206.1Porin, Gram-negative type. (357 aa)    
Predicted Functional Partners:
ADP14364.1
Thiol-disulfide isomerase and thioredoxins family protein.
  
     0.754
ADP14971.1
Hypothetical protein.
  
     0.739
ADP15109.1
Hypothetical protein.
  
     0.729
ADP17756.1
Hypothetical protein.
  
     0.695
ADP14582.1
Hypothetical protein.
  
   
 0.675
ADP19377.1
Hypothetical protein.
  
     0.644
ADP16144.1
NfeD-like family protein 1.
  
     0.638
ADP14369.1
Phasin family domain protein.
  
     0.619
ADP18268.1
Citrate lyase beta subunit-like protein; Belongs to the HpcH/HpaI aldolase family.
  
     0.615
ADP16103.1
Flagellar protein FliT.
  
     0.602
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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