Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17242.1Bacterial regulatory protein, GntR family protein 43. (243 aa)    
Predicted Functional Partners:
ADP15740.1
Bacterial regulatory protein, GntR family protein 22.
  
  
 0.778
ADP13366.1
Bacterial regulatory protein, GntR family protein 1.
  
     0.774
ADP13896.1
Bacterial regulatory protein, GntR family protein 9.
  
     0.774
ADP18812.1
Bacterial regulatory protein, GntR family protein 59.
  
     0.774
ADP16161.1
Bacterial regulatory protein, GntR family protein 30.
  
     0.773
ADP15883.1
Bacterial regulatory protein, GntR family protein 26.
  
     0.772
ADP16987.1
Bacterial regulatory protein, GntR family protein 40.
  
     0.769
ADP13387.1
Bacterial regulatory protein, GntR family protein 2.
  
     0.768
ADP14074.1
Bacterial regulatory protein, GntR family protein 10.
  
     0.768
ADP13817.1
Bacterial regulatory protein, GntR family protein 5.
  
     0.763
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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