Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17249.1Periplasmic binding family protein 3. (316 aa)    
Predicted Functional Partners:
fecE1
iron(III) dicitrate transport ATP-binding protein FecE 1.
 
  
 0.980
ADP17248.1
FecCD transport family protein 3; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.980
ADP17247.1
FecCD transport family protein 2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.979
ADP18757.1
Ferrichrome transport ATP-binding protein FhuC.
 
  
 0.943
ADP18759.1
Ferric anguibactin transport system permease protein FATD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.942
ADP18758.1
Ferric anguibactin transport system permease protein FATC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.941
ADP17250.1
Colicin I receptor.
     
 0.676
ADP16382.1
Periplasmic binding family protein 2.
  
  
 0.552
ADP16379.1
Ferric enterobactin transport ATP-binding protein FepC.
 
  
 0.519
ADP19174.1
Siderophore-interacting family protein.
 
  
 0.491
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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