STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17260.1Short chain dehydrogenase family protein 40. (251 aa)    
Predicted Functional Partners:
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.882
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.811
ADP17262.1
Putative membrane protein 49.
       0.728
fabG9
3-oxoacyl-[acyl-carrier-protein] reductase 9.
 
 
 
 0.576
ADP16448.1
Short chain dehydrogenase family protein 31.
 
 
 
 0.575
bdhA4
3-hydroxybutyrate dehydrogenase 4; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.569
ADP17108.1
Short chain dehydrogenase family protein 37.
 
 
 
 0.567
ADP14731.1
Short chain dehydrogenase family protein 18.
 
 
 
 0.562
ADP13943.1
Short chain dehydrogenase family protein 11.
 
 
 
 0.556
ADP19220.1
Short chain dehydrogenase family protein 59.
 
 
 
 0.552
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.