STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17406.1AroM family protein. (228 aa)    
Predicted Functional Partners:
ADP17407.1
Hypothetical protein.
 
     0.955
pepE
Peptidase E; Belongs to the peptidase S51 family.
 
     0.852
ADP17409.1
Bacterial transcriptional regulator family protein 21.
 
   
 0.802
ADP16330.1
Outer membrane autotransporter barrel domain protein 3.
  
     0.637
ADP17405.1
Extra-cytoplasmic solute receptor family protein 94.
 
     0.618
flgM
Negative regulator of flagellin synthesis.
  
     0.601
ADP15437.1
Hypothetical protein.
  
     0.560
ADP13657.1
2Fe-2S iron-sulfur cluster binding domain protein 1.
  
     0.556
ADP17844.1
Helix-turn-helix family protein 8.
  
     0.537
ADP16100.1
YcgR family protein.
  
     0.524
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.