STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcaF1Beta-ketoadipyl CoA thiolase 1; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)    
Predicted Functional Partners:
ADP18091.1
Hypothetical protein.
  
 0.941
ADP15518.1
3-oxoadipate CoA-transferase subunit B 1.
  
 
 0.937
ADP17977.1
3-oxoadipate CoA-transferase subunit B 2.
  
 
 0.937
ADP18363.1
3-oxoadipate CoA-transferase subunit B 3.
  
 
 0.937
ADP18708.1
3-oxoadipate CoA-transferase subunit B 4.
  
 
 0.937
ADP19248.1
3-oxoadipate CoA-transferase subunit B 5.
  
 
 0.937
fadJ2
Fatty acid oxidation complex subunit alpha 2; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.933
fadN
3-hydroxyacyl-CoA dehydrogenase.
 
 0.932
fadJ1
Fatty acid oxidation complex subunit alpha 1; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.931
ADP16970.1
enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.930
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.