STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17470.1Bacterial regulatory helix-turn-helix protein, LysR family protein 137; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
ADP13459.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 4; Belongs to the LysR transcriptional regulatory family.
  
     0.571
ADP14484.1
Transcriptional regulator, LysR family domain protein 1.
  
     0.560
ADP17471.1
GMC oxidoreductase family protein 4.
       0.509
ADP17472.1
Aldehyde dehydrogenase family protein 2.
       0.509
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.457
ADP17473.1
Catalase family protein.
     
 0.444
ADP19051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 185; Belongs to the LysR transcriptional regulatory family.
  
     0.435
ADP15882.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 73; Belongs to the LysR transcriptional regulatory family.
  
     0.420
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.401
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.