STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP17474.1Transcriptional activator protein LysR; Belongs to the LysR transcriptional regulatory family. (342 aa)    
Predicted Functional Partners:
lysA1
Diaminopimelate decarboxylase 1; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
     0.778
ADP13564.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 8; Belongs to the LysR transcriptional regulatory family.
  
     0.727
ADP16245.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 83; Belongs to the LysR transcriptional regulatory family.
  
     0.708
ADP19088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 188; Belongs to the LysR transcriptional regulatory family.
  
     0.700
ADP14730.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 45; Belongs to the LysR transcriptional regulatory family.
  
     0.694
ADP17153.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 127; Belongs to the LysR transcriptional regulatory family.
  
     0.693
ADP17100.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 124; Belongs to the LysR transcriptional regulatory family.
  
     0.685
ADP13754.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 11; Belongs to the LysR transcriptional regulatory family.
  
     0.684
ADP14001.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 20; Belongs to the LysR transcriptional regulatory family.
  
     0.658
ADP14072.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 23; Belongs to the LysR transcriptional regulatory family.
  
     0.653
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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