STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
garL22-dehydro-3-deoxyglucarate aldolase 2; Belongs to the HpcH/HpaI aldolase family. (257 aa)    
Predicted Functional Partners:
garL1
2-dehydro-3-deoxyglucarate aldolase 1; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.911
kdgD
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
    
  0.903
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
  
 0.881
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.742
ADP18189.1
Hydratase/decarboxylase family protein 2.
 
  
 0.697
ADP17492.1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit A.
  
  
 0.605
ADP15962.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein 2.
  
  
 0.563
ADP15961.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein 1.
  
  
 0.556
ADP17477.1
Extra-cytoplasmic solute receptor family protein 98.
       0.552
ADP18135.1
Hydratase/decarboxylase family protein 1.
  
  
 0.541
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.