Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17480.1Bacterial regulatory protein, GntR family protein 45. (257 aa)    
Predicted Functional Partners:
ADP17985.1
Bacterial regulatory protein, GntR family protein 52.
  
  
 0.760
ADP19299.1
Bacterial regulatory protein, GntR family protein 69.
  
  
 0.757
ADP14764.1
Bacterial regulatory protein, GntR family protein 15.
  
  
 0.749
ADP14151.1
Bacterial regulatory protein, GntR family protein 12.
  
  
 0.748
ADP13888.1
Bacterial regulatory protein, GntR family protein 8.
  
  
 0.741
ADP16896.1
Bacterial regulatory protein, GntR family protein 39.
  
  
 0.740
ADP17242.1
Bacterial regulatory protein, GntR family protein 43.
  
  
 0.735
ADP16305.1
Bacterial regulatory protein, GntR family protein 33.
  
  
 0.721
ADP16161.1
Bacterial regulatory protein, GntR family protein 30.
  
  
 0.667
ADP13366.1
Bacterial regulatory protein, GntR family protein 1.
  
  
 0.645
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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