STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hpaI2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family. (266 aa)    
Predicted Functional Partners:
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
 0.997
ADP17789.1
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.912
gabD1
Succinate-semialdehyde dehydrogenase [NADP+] 1.
  
 
 0.911
gabD2
Succinate-semialdehyde dehydrogenase [NADP+] 2; Belongs to the aldehyde dehydrogenase family.
  
 
 0.911
ADP18712.1
Aldehyde dehydrogenase family protein 3.
  
 
 0.911
gabD3
Succinate-semialdehyde dehydrogenase [NADP+] 3; Belongs to the aldehyde dehydrogenase family.
  
 
 0.911
gabD4
Succinate-semialdehyde dehydrogenase [NADP+] 4.
  
 
 0.911
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.852
ADP17492.1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit A.
  
  
 0.834
ADP17493.1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit B.
  
  
 0.735
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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