Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17561.1Uncharacterized lipoprotein NlpE involved in copper resistance family protein. (141 aa)    
Predicted Functional Partners:
ADP17562.1
Extracellular solute-binding protein, family 3 protein 3.
       0.685
ADP17560.1
OsmC-like family protein 2.
       0.530
ADP17559.1
Glutathione S-transferase, C-terminal domain protein 7.
       0.510
ADP17705.1
Hypothetical protein.
  
     0.453
pepE
Peptidase E; Belongs to the peptidase S51 family.
  
     0.417
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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