STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17563.1Regulatory protein, FmdB family domain protein 1. (110 aa)    
Predicted Functional Partners:
ADP17564.1
Formamidase.
 
     0.954
amiE
Aliphatic amidase.
 
     0.746
urtE1
Urea ABC transporter, ATP-binding protein UrtE 1.
 
     0.662
urtC1
Urea ABC transporter, permease protein UrtC 1; Belongs to the binding-protein-dependent transport system permease family.
 
     0.636
urtD1
Urea ABC transporter, ATP-binding protein UrtD 1.
 
     0.542
urtA
ABC transporter, substrate-binding UrtA.
 
     0.492
urtB1
Urea ABC transporter, permease protein UrtB 1; Belongs to the binding-protein-dependent transport system permease family.
 
    0.442
ADP17565.1
Sensory box protein 8.
       0.438
ADP16022.1
Receptor family ligand binding region family protein 15.
 
     0.409
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.