STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17583.1Hemolysin secretion/activation protein ShlB/FhaC/HecB family protein. (568 aa)    
Predicted Functional Partners:
ADP17582.1
Filamentous hemagglutinin family N-terminal domain protein 1.
 
 
 0.941
ADP19327.1
Gram-negative pili assembly chaperone, N-terminal domain protein 1.
 
  
 0.927
ADP19324.1
Fimbrial family protein 1.
 
  
 0.900
ADP19328.1
Fimbrial usher family protein 3.
 
  
 0.892
lpfC
Outer membrane usher protein LpfC.
 
  
 0.875
ADP19329.1
Gram-negative pili assembly chaperone, N-terminal domain protein 2.
 
  
 0.832
lpfB
Chaperone protein LpfB.
 
  
 0.820
ADP17124.1
Outer membrane autotransporter barrel domain protein 6.
 
 
 0.744
ADP14450.1
Type IV secretory pathway, VirB4 component.
   
    0.731
ADP14349.1
Gram-negative porin family protein 1.
   
  
 0.704
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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