Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17584.1Bacterial regulatory helix-turn-helix protein, MarR family protein 14. (170 aa)    
Predicted Functional Partners:
gsiA2
Glutathione import ATP-binding protein GsiA 2; Belongs to the ABC transporter superfamily.
       0.773
ADP16694.1
Bacterial extracellular solute-binding protein, family 7 family protein 1.
 
     0.692
ADP16695.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 5.
 
     0.664
ADP18334.1
Bacterial extracellular solute-binding protein, family 7 family protein 5.
 
     0.603
ADP17586.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 21.
       0.595
ADP16691.1
5-oxoprolinase.
 
     0.403
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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