Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17589.1Hypothetical protein. (579 aa)    
Predicted Functional Partners:
ADP17586.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 21.
 
     0.785
ADP17588.1
Oligopeptide transport system permease protein APPC.
 
     0.723
ADP17587.1
Binding-protein-dependent transport system inner membrane component family protein 49.
 
     0.717
ADP19018.1
Tetratricopeptide repeat family protein 13.
  
     0.636
ADP13627.1
Hypothetical protein.
 
 
 
 0.614
ADP14714.1
Bacterial regulatory protein, LuxR family protein 5.
 
 
   0.612
ADP17590.1
Acetyltransferase, GNAT family protein 19.
       0.593
ADP17844.1
Helix-turn-helix family protein 8.
 
     0.585
ADP17932.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 11.
  
     0.551
ADP16417.1
Hypothetical protein.
  
     0.524
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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