Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17591.1Hyp domain protein 2. (61 aa)    
Predicted Functional Partners:
ADP17592.1
Acetyltransferase, GNAT family protein 20.
       0.780
ADP17594.1
Peptidoglycan binding domain protein 1.
  
    0.659
ADP17593.1
Methyltransferase domain protein 7.
       0.571
ADP13985.1
MJ0042 family finger-like domain protein.
  
     0.497
ADP16851.1
Peptidase inhibitor I78 family protein.
  
     0.443
ADP16967.1
Hypothetical protein.
   
    0.440
ADP16786.1
RNA-binding S4 domain protein.
 
     0.439
ADP14902.1
Major facilitator superfamily protein 14.
  
     0.426
ADP17256.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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