STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17592.1Acetyltransferase, GNAT family protein 20. (202 aa)    
Predicted Functional Partners:
ADP17591.1
Hyp domain protein 2.
       0.780
ADP14517.1
Acetyltransferase, GNAT family protein 3.
  
     0.770
ADP17593.1
Methyltransferase domain protein 7.
       0.577
ADP17594.1
Peptidoglycan binding domain protein 1.
       0.575
ADP18838.1
Acetyltransferase, GNAT family protein 26.
 
   
 0.488
ADP15689.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 12.
 
  
 0.475
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.466
ADP13403.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 1.
 
  
 0.462
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.