STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17616.1Membrane protein-like protein 4. (145 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.929
hemF
Coproporphyrinogen 3 oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
    
 0.920
hemN1
Oxygen-independent coproporphyrinogen III oxidase 1; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.918
ADP14961.1
Hypothetical protein.
     
  0.900
ADP14392.1
Outer membrane autotransporter barrel domain protein 2.
  
     0.671
ADP17617.1
Large tegument domain protein.
 
     0.610
ADP19542.1
High-affinity nickel-transport family protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.582
ADP18870.1
Outer membrane autotransporter barrel domain protein 9.
  
     0.575
ADP19543.1
Hypothetical protein.
  
     0.574
pmtA
Phospholipid N-methyltransferase PmtA.
  
     0.547
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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