STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17629.1Tripartite ATP-independent periplasmic transporter, DctQ component family protein 10. (160 aa)    
Predicted Functional Partners:
ADP17628.1
TRAP transporter, DctM subunit 9.
 
 
 0.967
ADP17630.1
TRAP transporter solute receptor, DctP family protein 7.
 
  
 0.919
ADP15314.1
TRAP transporter, DctM subunit 1.
 
 
 0.861
ADP15354.1
TRAP transporter, DctM subunit 2.
 
 
 0.861
ADP15571.1
TRAP transporter, DctM subunit 3.
 
 
 0.861
ADP16414.1
TRAP transporter, DctM subunit 5.
 
 
 0.861
ADP17933.1
TRAP transporter, DctM subunit 10.
 
 
 0.861
ADP18850.1
TRAP transporter, DctM subunit 11.
 
 
 0.860
ADP17167.1
TRAP transporter, DctM subunit 8.
 
 
 0.859
ADP15316.1
TRAP transporter solute receptor, DctP family protein 1.
 
  
 0.851
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.