STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP17649.1Extra-cytoplasmic solute receptor family protein 107. (322 aa)    
Predicted Functional Partners:
tauD1
Alpha-ketoglutarate-dependent taurine dioxygenase 1.
       0.737
ADP14115.1
Hypothetical protein.
 
  
 0.703
ADP17997.1
Hypothetical protein.
 
  
 0.696
ADP16525.1
Hypothetical protein.
 
  
 0.669
ADP14109.1
Hypothetical protein.
 
  
 0.647
ADP14116.1
Hypothetical protein.
 
  
 0.627
ADP17648.1
IclR helix-turn-helix domain protein 1.
 
     0.593
ADP14108.1
Hypothetical protein.
 
  
 0.529
ADP16524.1
Hypothetical protein.
 
  
 0.503
ADP19792.1
Hypothetical protein.
 
  
 0.414
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.