Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17676.1Transmembrane protein 2. (78 aa)    
Predicted Functional Partners:
ccoG
Cytochrome c oxidase accessory protein CcoG.
 
  
 0.945
ADP17677.1
FixH family protein.
  
  
 0.934
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.782
ADP17680.1
Cytochrome c oxidase subunit.
  
    0.711
ADP13578.1
Hypothetical protein.
  
     0.694
ADP14286.1
Ring hydroxylating beta subunit family protein 2.
  
     0.682
gspN
General secretion pathway protein N.
  
     0.664
ADP14022.1
Hypothetical protein.
  
     0.655
ADP17684.1
Heavy metal translocating P-type ATPase.
 
   
 0.641
ccoO
Cytochrome c oxidase, cbb3-type, subunit II.
 
     0.628
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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