STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acrBAcriflavine resistance protein B. (1077 aa)    
Predicted Functional Partners:
bpeA3
Periplasmic linker protein 3; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.993
bpeA1
Periplasmic linker protein 1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.985
amrA
Membrane fusion protein AmrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.971
ADP14059.1
Efflux transporter, RND family, MFP subunit 2; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.962
ADP17700.1
Outer membrane protein OprM 4; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.944
ADP18237.1
Type I secretion outer membrane protein, TolC family protein 3.
 
 0.937
ADP13861.1
Type I secretion outer membrane protein, TolC family protein 1.
  
 0.928
ADP19149.1
Outer membrane efflux family protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.926
ADP14060.1
AcrB/AcrD/AcrF family protein 1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.917
mexB1
Multidrug resistance protein MexB 1.
  
  
 
0.903
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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