STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
acnA1Aconitate hydratase 1; Belongs to the aconitase/IPM isomerase family. (863 aa)    
Predicted Functional Partners:
icd1
Isocitrate dehydrogenase, NADP-dependent 1.
  
 
 0.983
icd2
Isocitrate dehydrogenase, NADP-dependent 2; Belongs to the monomeric-type IDH family.
 
 
 0.953
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.949
aceA
Isocitrate lyase.
  
 
 0.921
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.918
prpD
2-methylcitrate dehydratase.
     
 0.917
prpF
AcnD-accessory protein PrpF.
    
 0.917
acnA2
Aconitate hydratase 2; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
 0.916
acnA3
Aconitate hydratase 3.
    
 0.916
acnA4
Aconitate hydratase 4; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
 0.916
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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