STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP17752.1Short chain dehydrogenase family protein 42. (308 aa)    
Predicted Functional Partners:
ADP17751.1
AMP-binding enzyme family protein 19.
 
 
 0.826
ADP17217.1
Short chain dehydrogenase family protein 39.
  
     0.609
ADP17750.1
Extra-cytoplasmic solute receptor family protein 111.
       0.608
ADP16449.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
     0.571
ADP17753.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 146; Belongs to the LysR transcriptional regulatory family.
       0.541
ADP18608.1
Short chain dehydrogenase family protein 53; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.478
ADP18272.1
Short chain dehydrogenase family protein 49; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.472
ADP17260.1
Short chain dehydrogenase family protein 40.
 
 
 0.458
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.448
ADP16779.1
acyl-CoA dehydrogenase, middle domain protein 8.
 
  0.428
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.