STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17762.1Hypothetical protein. (680 aa)    
Predicted Functional Partners:
ADP17764.1
Tetratricopeptide repeat family protein 9.
 
  
 0.954
ADP17766.1
Bacterial type II secretion system protein F domain protein 4.
 
  
 0.884
ADP17765.1
Bacterial type II secretion system protein F domain protein 3.
 
  
 0.883
cpaE
Pilus assembly protein CpaE.
 
  
 0.880
cpaB2
Flp pilus assembly protein CpaB 2.
 
  
 0.866
ADP17767.1
CpaF domain protein.
 
  
 0.848
ADP17769.1
Bacterial type II and III secretion system family protein 2; Belongs to the bacterial secretin family.
 
  
 0.828
ADP17773.1
Type IV leader peptidase family protein 1.
 
     0.787
ADP18668.1
parB-like nuclease family protein.
  
     0.769
ADP17761.1
Sigma-54 interaction domain protein 2.
 
     0.764
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.