STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpaB2Flp pilus assembly protein CpaB 2. (319 aa)    
Predicted Functional Partners:
cpaE
Pilus assembly protein CpaE.
 
  
 0.980
ADP17773.1
Type IV leader peptidase family protein 1.
 
  
 0.973
ADP17769.1
Bacterial type II and III secretion system family protein 2; Belongs to the bacterial secretin family.
 
  
 0.969
ADP17766.1
Bacterial type II secretion system protein F domain protein 4.
 
  
 0.966
ADP17765.1
Bacterial type II secretion system protein F domain protein 3.
 
  
 0.956
ADP17771.1
TadE-like family protein 3.
 
  
 0.952
ADP17767.1
CpaF domain protein.
 
  
 0.947
ADP17764.1
Tetratricopeptide repeat family protein 9.
 
  
 0.935
ADP17772.1
TadE family protein.
  
  
 0.927
ADP17774.1
Flp/Fap pilin component family protein.
 
  
 0.920
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.