Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP17776.1POTRA domain, ShlB-type family protein. (553 aa)    
Predicted Functional Partners:
ADP17777.1
PE-PGRS family protein.
 
     0.874
ADP17764.1
Tetratricopeptide repeat family protein 9.
  
   
 0.747
ADP15479.1
Type IV pilus assembly protein 1.
  
    0.735
cpaE
Pilus assembly protein CpaE.
  
     0.729
ADP16103.1
Flagellar protein FliT.
  
     0.708
ADP17762.1
Hypothetical protein.
  
     0.686
ADP17765.1
Bacterial type II secretion system protein F domain protein 3.
  
     0.669
ADP17766.1
Bacterial type II secretion system protein F domain protein 4.
  
     0.663
ADP17771.1
TadE-like family protein 3.
 
     0.659
ADP19332.1
Surface antigen variable number repeat family protein.
  
  
 
0.633
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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