STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17783.1Thermonuclease family protein. (219 aa)    
Predicted Functional Partners:
ADP17782.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 22.
  
    0.630
ADP17784.1
CorA-like Mg2+ transporter family protein.
  
    0.628
ADP17781.1
Binding-protein-dependent transport system inner membrane component family protein 51.
       0.570
ADP17780.1
Binding-protein-dependent transport system inner membrane component family protein 50.
       0.569
ADP17779.1
ABC transporter family protein 72; Belongs to the ABC transporter superfamily.
       0.534
ADP18953.1
Acyltransferase family protein 6.
  
  
 0.490
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.482
ADP17785.1
UvrD/Rep helicase family protein 1.
       0.476
ADP13567.1
Ferredoxin-dependent glutamate synthase.
     
 0.430
hrpA
ATP-dependent helicase HrpA.
  
 0.421
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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