STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabT24-aminobutyrate transaminase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (421 aa)    
Predicted Functional Partners:
ADP17789.1
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.964
mmsA1
Methylmalonate-semialdehyde dehydrogenase (acylating) 1.
  
 0.931
mmsA2
Methylmalonate-semialdehyde dehydrogenase (acylating) 2.
  
 0.931
ADP15931.1
Aldehyde dehydrogenase family protein 1; Belongs to the aldehyde dehydrogenase family.
 
 0.931
gabD1
Succinate-semialdehyde dehydrogenase [NADP+] 1.
  
 0.931
gabD2
Succinate-semialdehyde dehydrogenase [NADP+] 2; Belongs to the aldehyde dehydrogenase family.
  
 0.931
ADP18041.1
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.931
ADP18712.1
Aldehyde dehydrogenase family protein 3.
  
 0.931
mmsA3
Methylmalonate-semialdehyde dehydrogenase (acylating) 3.
  
 0.931
gabD3
Succinate-semialdehyde dehydrogenase [NADP+] 3; Belongs to the aldehyde dehydrogenase family.
  
 0.931
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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