STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADP17789.1Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)    
Predicted Functional Partners:
gabT2
4-aminobutyrate transaminase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.965
gabT1
4-aminobutyrate transaminase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.941
ADP14734.1
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 2.
  
 
 0.913
hpaI
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.912
ADP18146.1
succinyl-CoA:coenzyme A transferase.
  
 
 0.911
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.882
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.882
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 0.872
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.868
icd1
Isocitrate dehydrogenase, NADP-dependent 1.
   
 0.866
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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