Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17825.1Extra-cytoplasmic solute receptor family protein 112. (324 aa)    
Predicted Functional Partners:
ADP18120.1
Receptor family ligand binding region family protein 21.
   
    0.921
ADP18030.1
Aldehyde dehydrogenase subunit III.
   
    0.865
ADP16592.1
Oxidoreductase FAD-binding domain protein 3.
   
    0.855
ADP18507.1
Oxidoreductase FAD-binding domain protein 4.
   
    0.855
ADP17827.1
TonB-dependent siderophore receptor family protein 14.
  
    0.842
ADP14115.1
Hypothetical protein.
 
  
 0.813
ADP17997.1
Hypothetical protein.
 
  
 0.812
ADP16525.1
Hypothetical protein.
 
  
 0.805
ADP14109.1
Hypothetical protein.
 
  
 0.791
ADP17824.1
Sulfatase family protein 10.
       0.775
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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